Package: neutralitytestr
Title: Test for a Neutral Evolutionary Model in Cancer Sequencing Data
Version: 0.0.3
Authors@R: person("Marc", "Williams", email = "marcjwilliams1@gmail.com", role = c("aut", "cre"))
Description: Package takes frequencies of mutations as reported by high
        throughput sequencing data from cancer and fits a theoretical
        neutral model of tumour evolution. Package outputs summary
        statistics and contains code for plotting the data and model
        fits. See Williams et al 2016 <doi:10.1038/ng.3489> and
        Williams et al 2017 <doi:10.1101/096305> for further details of
        the method.
Depends: R (>= 3.4)
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Imports: dplyr, ggplot2, scales, pracma, ggpmisc, cowplot
Suggests: knitr, rmarkdown, testthat
VignetteBuilder: knitr
URL: https://github.com/marcjwilliams1/neutralitytestr
BugReports: https://github.com/marcjwilliams1/neutralitytestr/issues
RoxygenNote: 7.1.1
Config/pak/sysreqs: libicu-dev
Repository: https://marcjwilliams1.r-universe.dev
Date/Publication: 2021-02-16 17:30:41 UTC
RemoteUrl: https://github.com/marcjwilliams1/neutralitytestr
RemoteRef: HEAD
RemoteSha: 86911335a5b22c161adcd6184665faaf0386a95d
NeedsCompilation: no
Packaged: 2026-07-16 07:01:41 UTC; root
Author: Marc Williams [aut, cre]
Maintainer: Marc Williams <marcjwilliams1@gmail.com>