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neutralitytestr - Test for a Neutral Evolutionary Model in Cancer Sequencing Data

Package takes frequencies of mutations as reported by high throughput sequencing data from cancer and fits a theoretical neutral model of tumour evolution. Package outputs summary statistics and contains code for plotting the data and model fits. See Williams et al 2016 <doi:10.1038/ng.3489> and Williams et al 2017 <doi:10.1101/096305> for further details of the method.

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5.10 score 10 stars 25 scripts 214 downloads